STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3860Sugar binding protein of sugar ABC transporter. (332 aa)    
Predicted Functional Partners:
KKY_2593
Ribose ABC transport system, permease protein RbsC; 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.971
KKY_3866
Ribose ABC transport system, permease protein RbsC; 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.971
KKY_2222
Ribose ABC transport system, permease protein RbsC; 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.923
KKY_3865
Ribose ABC transport system, ATP-binding protein RbsA; 3.A.1.2.1.
 
 0.919
KKY_2594
Ribose ABC transport system, ATP-binding protein RbsA; 3.A.1.2.1.
 
 0.918
KKY_2223
Ribose ABC transport system, ATP-binding protein RbsA; 3.A.1.2.1.
 
 0.898
KKY_1546
PAS/PAC domain protein.
   
 
 0.878
KKY_1846
Sensory box histidine kinase/response regulator.
   
 
 0.834
KKY_3552
Two-component hybrid sensor and regulator.
  
 
 0.828
KKY_385
Sensor histidine kinase.
  
 
 0.821
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.