STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3897Transcriptional regulator of mannitol utilization, DeoR family protein. (317 aa)    
Predicted Functional Partners:
KKY_3898
Various polyols ABC transporter, periplasmic substrate-binding protein.
 
     0.809
KKY_3900
Various polyols ABC transporter, permease component 2.
 
   
 0.771
KKY_3899
Various polyols ABC transporter, permease component 1.
 
     0.768
KKY_3902
Multiple polyol-specific dehydrogenase; Belongs to the mannitol dehydrogenase family.
 
     0.700
KKY_3904
D-ribulokinase.
 
     0.565
KKY_3896
Hypothetical protein.
       0.555
KKY_3901
Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
     0.436
KKY_3903
Putative hydrolase family protein.
 
     0.420
xylB
Xylulose kinase.
 
  
 0.412
KKY_1214
Various polyols ABC transporter, periplasmic substrate-binding protein.
 
     0.408
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.