STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3929Putative iron compound-binding protein of ABC transporter family. (318 aa)    
Predicted Functional Partners:
KKY_2354
Iron3+ dicitrate transport ATP-binding protein FecE; 3.A.1.14.1.
 
   0.781
KKY_2472
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
  
 0.747
KKY_1991
ABC transporter related protein.
 
   0.735
KKY_1168
Ferric enterobactin transport ATP-binding protein.
 
   0.727
KKY_2351
cobalamin/Fe3+-siderophores transport systems, secreted component.
  
     0.646
KKY_2031
Serine protease; Belongs to the peptidase S8 family.
  
     0.644
KKY_2350
cobalamin/Fe3+-siderophores transport systems, secreted component.
  
     0.610
KKY_1429
iron(III) dicitrate transport system, periplasmic iron-binding protein FecB; 3.A.1.14.1.
  
     0.591
KKY_3928
Hypothetical protein.
 
    0.581
KKY_3437
Iron ABC transporter, substrate binding protein.
  
     0.513
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.