STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANT49400.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. (308 aa)    
Predicted Functional Partners:
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.621
secB
Excinuclease ABC subunit C; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.502
ANT49401.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
ANT52550.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
   
 0.472
ANT48989.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.457
ANT49399.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
 
  
 0.415
ANT52555.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.401
Your Current Organism:
Mesorhizobium amorphae
NCBI taxonomy Id: 1082933
Other names: M. amorphae CCNWGS0123, Mesorhizobium amorphae CCNWGS0123, Mesorhizobium amorphae str. CCNWGS0123, Mesorhizobium amorphae strain CCNWGS0123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.