STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANT52687.1Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)    
Predicted Functional Partners:
ANT52689.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
ANT52688.1
Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.928
ANT52690.1
Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
 
     0.870
ANT52691.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.782
ANT52686.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.686
ANT52693.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.616
ANT52692.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.540
ANT52694.1
Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
     0.498
ANT50935.1
Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.469
ANT49454.1
6-hydroxynicotinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.404
Your Current Organism:
Mesorhizobium amorphae
NCBI taxonomy Id: 1082933
Other names: M. amorphae CCNWGS0123, Mesorhizobium amorphae CCNWGS0123, Mesorhizobium amorphae str. CCNWGS0123, Mesorhizobium amorphae strain CCNWGS0123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.