STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001308105_02631Unannotated protein. (602 aa)    
Predicted Functional Partners:
GCA_001308105_01542
Unannotated protein.
 
 0.997
GCA_001308105_00293
Unannotated protein.
 
 0.991
GCA_001308105_00583
Unannotated protein.
 
 0.985
GCA_001308105_02515
Unannotated protein.
    
  0.975
GCA_001308105_02764
Unannotated protein.
  
 
 0.950
GCA_001308105_03563
Unannotated protein.
  
 
 
0.937
GCA_001308105_01111
Unannotated protein.
  
 
 
0.916
GCA_001308105_00480
Unannotated protein.
  
  
 
0.911
GCA_001308105_05393
Unannotated protein.
 
   
  0.753
GCA_001308105_00938
Unannotated protein.
     
 0.716
Your Current Organism:
Persicobacter sp. JZB09
NCBI taxonomy Id: 1085624
Other names: P. sp. JZB09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.