STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001308105_03952Unannotated protein. (841 aa)    
Predicted Functional Partners:
GCA_001308105_03953
Unannotated protein.
 
 
  0.803
GCA_001308105_06079
Unannotated protein.
  
 
  0.721
GCA_001308105_03951
Unannotated protein.
 
  
  0.686
GCA_001308105_02236
Unannotated protein.
  
     0.621
GCA_001308105_05639
Unannotated protein.
  
     0.619
GCA_001308105_05596
Unannotated protein.
  
 
  0.617
GCA_001308105_03857
Unannotated protein.
  
     0.616
GCA_001308105_03629
Unannotated protein.
  
 
  0.612
GCA_001308105_03187
Unannotated protein.
    
  0.585
GCA_001308105_03719
Unannotated protein.
     
  0.580
Your Current Organism:
Persicobacter sp. JZB09
NCBI taxonomy Id: 1085624
Other names: P. sp. JZB09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.