STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001308105_05647Unannotated protein. (513 aa)    
Predicted Functional Partners:
GCA_001308105_00959
Unannotated protein.
  
 0.889
GCA_001308105_05614
Unannotated protein.
  
 
   0.783
GCA_001308105_05221
Unannotated protein.
  
 
  0.774
GCA_001308105_05759
Unannotated protein.
  
 
   0.766
GCA_001308105_05754
Unannotated protein.
  
 
   0.765
GCA_001308105_00202
Unannotated protein.
   
 0.764
GCA_001308105_05653
Unannotated protein.
  
 
   0.764
GCA_001308105_05659
Unannotated protein.
  
 
   0.759
GCA_001308105_01865
Unannotated protein.
    
  0.758
GCA_001308105_03144
Unannotated protein.
   
  0.758
Your Current Organism:
Persicobacter sp. JZB09
NCBI taxonomy Id: 1085624
Other names: P. sp. JZB09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.