STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001308105_05936Unannotated protein. (373 aa)    
Predicted Functional Partners:
GCA_001308105_05935
Unannotated protein.
    
  0.808
GCA_001308105_05934
Unannotated protein.
       0.773
GCA_001308105_06093
Unannotated protein.
  
  
  0.739
GCA_001308105_06106
Unannotated protein.
  
     0.727
GCA_001308105_06319
Unannotated protein.
  
     0.601
GCA_001308105_06102
Unannotated protein.
  
     0.542
GCA_001308105_05581
Unannotated protein.
  
  
 
0.497
GCA_001308105_05582
Unannotated protein.
  
  
 
0.497
GCA_001308105_04937
Unannotated protein.
  
  
 
0.496
GCA_001308105_05892
Unannotated protein.
  
  
 
0.496
Your Current Organism:
Persicobacter sp. JZB09
NCBI taxonomy Id: 1085624
Other names: P. sp. JZB09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.