STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001308105_05977Unannotated protein. (408 aa)    
Predicted Functional Partners:
GCA_001308105_05978
Unannotated protein.
       0.773
GCA_001308105_03128
Unannotated protein.
     
 0.679
GCA_001308105_05904
Unannotated protein.
     
 0.679
GCA_001308105_00629
Unannotated protein.
   
 
 0.640
GCA_001308105_05146
Unannotated protein.
   
 
 0.529
GCA_001308105_02243
Unannotated protein.
   
  0.526
GCA_001308105_02440
Unannotated protein.
   
  0.526
GCA_001308105_03512
Unannotated protein.
   
  0.526
GCA_001308105_03707
Unannotated protein.
   
  0.526
GCA_001308105_04594
Unannotated protein.
   
  0.526
Your Current Organism:
Persicobacter sp. JZB09
NCBI taxonomy Id: 1085624
Other names: P. sp. JZB09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.