STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIA08373.1Putative transmembrane protein. (146 aa)    
Predicted Functional Partners:
EIA08374.1
Hypothetical protein.
 
     0.960
EIA09693.1
Ferredoxin--sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
    0.456
EIA08483.1
Metallo-beta-lactamase family protein.
 
    0.454
EIA08372.1
Hypothetical protein.
       0.432
Your Current Organism:
Flavobacterium frigoris
NCBI taxonomy Id: 1086011
Other names: F. frigoris PS1, Flavobacterium frigoris PS1, Flavobacterium frigoris str. PS1, Flavobacterium frigoris strain PS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.