STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H9ZSJ6CCHC-type domain-containing protein. (722 aa)    
Predicted Functional Partners:
RPL21A
60S ribosomal protein L21-1.
   
   0.575
A0A2I0B747
Uncharacterized protein.
    
  0.449
rpl2-A-2
50S ribosomal protein L2, chloroplastic.
   
   0.429
rpl2-A-3
50S ribosomal protein L2, chloroplastic.
   
   0.429
RPL11B
60S ribosomal protein L11-2; Belongs to the universal ribosomal protein uL5 family.
    
  0.427
RPL39C
60S ribosomal protein L39-3.
   
   0.426
RPL39C-2
60S ribosomal protein L39-3.
   
   0.426
RPL39
60S ribosomal protein L39.
   
   0.426
RPL13AA
60S ribosomal protein L13a-1; Belongs to the universal ribosomal protein uL13 family.
   
   0.425
RPL13AD
60S ribosomal protein L13a-4; Belongs to the universal ribosomal protein uL13 family.
   
   0.425
Your Current Organism:
Apostasia shenzhenica
NCBI taxonomy Id: 1088818
Other names: A. shenzhenica, Apostasia shenzhenica Z.J.Liu & L.J.Chen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.