STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIN_02070Multidrug resistance protein A. (366 aa)    
Predicted Functional Partners:
CIN_02080
Multidrug ABC transporter; Belongs to the major facilitator superfamily.
 
 0.984
CIN_08800
Hypothetical protein; Belongs to the major facilitator superfamily.
 
 0.868
CIN_07680
Hypothetical protein.
 
 0.811
CIN_17560
Hypothetical protein.
  
 0.806
CIN_21960
Secretion system type I outer membrane efflux pump lipoprotein NodT.
  
 0.806
CIN_01920
Outer membrane protein.
  
 0.802
CIN_01540
Secretion system type I outer membrane efflux pump lipoprotein NodT.
  
 0.788
CIN_15250
Hypothetical protein.
  
 0.767
CIN_03970
tRNA/rRNA cytosine-C5-methylase Nol1/Nop2/Sun; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
      0.700
CIN_15270
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.602
Your Current Organism:
Commensalibacter intestini
NCBI taxonomy Id: 1088868
Other names: Acetobacteraceae bacterium A911, C. intestini A911, Commensalibacter intestini A911, Commensalibacter intestini JCM 15511, Commensalibacter intestini KCTC 22117, Commensalibacter intestini str. A911, Commensalibacter intestini strain A911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.