STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIN_11200DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (285 aa)    
Predicted Functional Partners:
CIN_11210
Membrane-bound lytic murein transglycosylase.
       0.757
CIN_11220
Hypothetical protein.
       0.692
CIN_11190
Cytochrome c peroxidase.
  
    0.518
CIN_05710
Hypothetical protein.
  
     0.431
CIN_05740
Hypothetical protein.
  
 
   0.427
CIN_00480
Hypothetical protein.
  
     0.404
Your Current Organism:
Commensalibacter intestini
NCBI taxonomy Id: 1088868
Other names: Acetobacteraceae bacterium A911, C. intestini A911, Commensalibacter intestini A911, Commensalibacter intestini JCM 15511, Commensalibacter intestini KCTC 22117, Commensalibacter intestini str. A911, Commensalibacter intestini strain A911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.