STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIN_14870Alpha-ketoglutarate permease. (410 aa)    
Predicted Functional Partners:
CIN_14880
Zinc-binding dehydrogenase.
 
     0.758
CIN_14860
Short-chain dehydrogenase/reductase SDR.
 
     0.708
CIN_14840
Dihydroxyacetone kinase, L subunit.
       0.519
CIN_14850
Dihydroxyacetone kinase, DhaK subunit.
       0.519
CIN_16670
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.511
CIN_16680
Nitrate reductase beta subunit.
   
 
 0.484
CIN_16700
Nitrate reductase gamma subunit.
   
 
 0.453
CIN_16690
Nitrate reductase delta subunit.
   
  
 0.400
Your Current Organism:
Commensalibacter intestini
NCBI taxonomy Id: 1088868
Other names: Acetobacteraceae bacterium A911, C. intestini A911, Commensalibacter intestini A911, Commensalibacter intestini JCM 15511, Commensalibacter intestini KCTC 22117, Commensalibacter intestini str. A911, Commensalibacter intestini strain A911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.