STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIN_15370Putative multidrug transport protein. (431 aa)    
Predicted Functional Partners:
CIN_18140
Hypothetical protein.
  
     0.558
CIN_15380
Putative oxidoreductase.
       0.504
CIN_15390
Choloylglycine hydrolase.
       0.467
CIN_05740
Hypothetical protein.
  
     0.431
CIN_04580
Insulinase protein.
  
     0.430
CIN_20300
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.426
CIN_11890
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.418
CIN_17860
Squalene synthase HpnC.
   
   0.413
CIN_17870
Putative phytoene synthase.
   
   0.413
CIN_19150
Hypothetical protein.
   
   0.413
Your Current Organism:
Commensalibacter intestini
NCBI taxonomy Id: 1088868
Other names: Acetobacteraceae bacterium A911, C. intestini A911, Commensalibacter intestini A911, Commensalibacter intestini JCM 15511, Commensalibacter intestini KCTC 22117, Commensalibacter intestini str. A911, Commensalibacter intestini strain A911
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.