STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIN_15400Metabolite transport protein. (398 aa)    
Predicted Functional Partners:
CIN_15410
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
       0.709
CIN_21050
Hypothetical protein.
  
 
 0.563
CIN_16460
Transporter, major facilitator family protein.
  
  
  0.525
CIN_15390
Choloylglycine hydrolase.
  
    0.518
CIN_15380
Putative oxidoreductase.
       0.480
CIN_12650
5-methyltetrahydrofolate-S-homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.471
CIN_19220
Hypothetical protein.
   
 
  0.467
CIN_00800
High-affinity nickel transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.464
CIN_15440
Hypothetical protein.
 
     0.446
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
       0.411
Your Current Organism:
Commensalibacter intestini
NCBI taxonomy Id: 1088868
Other names: Acetobacteraceae bacterium A911, C. intestini A911, Commensalibacter intestini A911, Commensalibacter intestini JCM 15511, Commensalibacter intestini KCTC 22117, Commensalibacter intestini str. A911, Commensalibacter intestini strain A911
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