STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIN_21190Hypothetical protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (353 aa)    
Predicted Functional Partners:
CIN_21050
Hypothetical protein.
     
 0.895
CIN_21200
Biotin synthesis protein bioC.
 
     0.804
CIN_21060
Hypothetical protein.
  
 
 0.763
CIN_04100
Hypothetical protein.
 
     0.632
CIN_18730
Hypothetical protein.
 
    0.594
CIN_18720
Hypothetical protein.
 
      0.593
CIN_21180
Hypothetical protein.
       0.547
CIN_04710
Binding-protein-dependent transport system inner membrane component.
      0.537
CIN_21210
Phosphomanno mutase.
       0.515
CIN_21220
Phosphomannomutase.
       0.508
Your Current Organism:
Commensalibacter intestini
NCBI taxonomy Id: 1088868
Other names: Acetobacteraceae bacterium A911, C. intestini A911, Commensalibacter intestini A911, Commensalibacter intestini JCM 15511, Commensalibacter intestini KCTC 22117, Commensalibacter intestini str. A911, Commensalibacter intestini strain A911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.