STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIN_21960Secretion system type I outer membrane efflux pump lipoprotein NodT. (524 aa)    
Predicted Functional Partners:
CIN_15260
Multidrug resistance protein mexB.
 
  0.986
CIN_15270
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.916
CIN_01950
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.876
CIN_02070
Multidrug resistance protein A.
  
 0.806
CIN_01530
Multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.795
CIN_01940
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.786
CIN_01930
Putative multidrug resistance protein mdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.719
CIN_17570
Putative protein YdhJ; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.684
CIN_01520
Nodulation protein nolG; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.612
CIN_12630
Hypothetical protein.
   
  0.575
Your Current Organism:
Commensalibacter intestini
NCBI taxonomy Id: 1088868
Other names: Acetobacteraceae bacterium A911, C. intestini A911, Commensalibacter intestini A911, Commensalibacter intestini JCM 15511, Commensalibacter intestini KCTC 22117, Commensalibacter intestini str. A911, Commensalibacter intestini strain A911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.