STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMO_15820HlyD family secretion protein. (485 aa)    
Predicted Functional Partners:
GMO_15830
Secretion ATP-binding protein.
    0.955
GMO_15810
Hypothetical protein.
 
     0.668
GMO_12380
Outer membrane protein TolC.
  
  0.609
GMO_15800
Glycosyltransferase.
 
     0.552
GMO_15790
Hypothetical protein.
 
     0.521
GMO_03040
Hypothetical protein.
  
     0.500
GMO_15780
Glycosyltransferase.
 
     0.492
GMO_09410
Nodulation protein nolG; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.489
GMO_09910
Putative multidrug resistance protein mdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.489
GMO_15570
Acriflavin resistance protein B.
   
  0.489
Your Current Organism:
Gluconobacter morbifer
NCBI taxonomy Id: 1088869
Other names: G. morbifer G707, Gluconobacter morbifer G707, Gluconobacter morbifer JCM 15512, Gluconobacter morbifer KCTC 22116, Gluconobacter morbifer str. G707, Gluconobacter morbifer strain G707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.