STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG44673.1Cytochrome c oxidase assembly protein subunit 15. (346 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.994
SHG44565.1
HDIG domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.810
SHG44625.1
Acetyltransferase (GNAT) family protein.
       0.773
SHG69149.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.769
SHG69102.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.737
SHH41109.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
    
  0.731
SHG44719.1
pRiA4b ORF-3-like protein.
       0.721
SHG68530.1
Cytochrome c oxidase subunit 3.
 
 
 0.693
SHG68582.1
Cytochrome c oxidase subunit 3.
 
 
 0.598
SHG44491.1
Methyltransferase domain-containing protein.
       0.533
Your Current Organism:
Winogradskyella jejuensis
NCBI taxonomy Id: 1089305
Other names: DSM 25330, JCM 18454, KCTC 23835, W. jejuensis, Winogradskyella jejuensis Kim and Oh 2015, Winogradskyella sp. CP32, strain CP32
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