Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG80817.1 | SHG86814.1 | SAMN05444148_0997 | SAMN05444148_1143 | Hypothetical protein. | Cytochrome c peroxidase. | 0.788 |
SHG80817.1 | SHH44197.1 | SAMN05444148_0997 | SAMN05444148_2025 | Hypothetical protein. | Haem-binding domain-containing protein. | 0.788 |
SHG80817.1 | SHH75721.1 | SAMN05444148_0997 | SAMN05444148_2726 | Hypothetical protein. | Imidazolonepropionase. | 0.436 |
SHG86814.1 | SHG80817.1 | SAMN05444148_1143 | SAMN05444148_0997 | Cytochrome c peroxidase. | Hypothetical protein. | 0.788 |
SHG86814.1 | SHH75721.1 | SAMN05444148_1143 | SAMN05444148_2726 | Cytochrome c peroxidase. | Imidazolonepropionase. | 0.439 |
SHG86814.1 | SHH80008.1 | SAMN05444148_1143 | SAMN05444148_2851 | Cytochrome c peroxidase. | Peptidylamidoglycolate lyase. | 0.788 |
SHH03569.1 | SHH75721.1 | SAMN05444148_1551 | SAMN05444148_2726 | OmpA family protein. | Imidazolonepropionase. | 0.500 |
SHH44197.1 | SHG80817.1 | SAMN05444148_2025 | SAMN05444148_0997 | Haem-binding domain-containing protein. | Hypothetical protein. | 0.788 |
SHH44197.1 | SHH75721.1 | SAMN05444148_2025 | SAMN05444148_2726 | Haem-binding domain-containing protein. | Imidazolonepropionase. | 0.439 |
SHH44197.1 | SHH80008.1 | SAMN05444148_2025 | SAMN05444148_2851 | Haem-binding domain-containing protein. | Peptidylamidoglycolate lyase. | 0.788 |
SHH60734.1 | SHH75721.1 | SAMN05444148_2437 | SAMN05444148_2726 | Hypothetical protein. | Imidazolonepropionase. | 0.499 |
SHH61989.1 | SHH75721.1 | SAMN05444148_2474 | SAMN05444148_2726 | N-formylglutamate amidohydrolase. | Imidazolonepropionase. | 0.445 |
SHH64475.1 | SHH75721.1 | SAMN05444148_2542 | SAMN05444148_2726 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.627 |
SHH64475.1 | hutU | SAMN05444148_2542 | SAMN05444148_1532 | Histidine ammonia-lyase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.999 |
SHH75679.1 | SHH75721.1 | SAMN05444148_2725 | SAMN05444148_2726 | Por secretion system C-terminal sorting domain-containing protein. | Imidazolonepropionase. | 0.484 |
SHH75721.1 | SHG80817.1 | SAMN05444148_2726 | SAMN05444148_0997 | Imidazolonepropionase. | Hypothetical protein. | 0.436 |
SHH75721.1 | SHG86814.1 | SAMN05444148_2726 | SAMN05444148_1143 | Imidazolonepropionase. | Cytochrome c peroxidase. | 0.439 |
SHH75721.1 | SHH03569.1 | SAMN05444148_2726 | SAMN05444148_1551 | Imidazolonepropionase. | OmpA family protein. | 0.500 |
SHH75721.1 | SHH44197.1 | SAMN05444148_2726 | SAMN05444148_2025 | Imidazolonepropionase. | Haem-binding domain-containing protein. | 0.439 |
SHH75721.1 | SHH60734.1 | SAMN05444148_2726 | SAMN05444148_2437 | Imidazolonepropionase. | Hypothetical protein. | 0.499 |
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