STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH75721.1Imidazolonepropionase. (1134 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.730
SHH64475.1
Histidine ammonia-lyase.
  
  
 0.627
SHH03569.1
OmpA family protein.
  
   0.500
SHH60734.1
Hypothetical protein.
    
 
 0.499
SHH75679.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.484
SHH61989.1
N-formylglutamate amidohydrolase.
  
  
 0.445
SHG86814.1
Cytochrome c peroxidase.
  
   0.439
SHH44197.1
Haem-binding domain-containing protein.
  
   0.439
SHG80817.1
Hypothetical protein.
   
   0.436
SHH80008.1
Peptidylamidoglycolate lyase.
   
   0.436
Your Current Organism:
Winogradskyella jejuensis
NCBI taxonomy Id: 1089305
Other names: DSM 25330, JCM 18454, KCTC 23835, W. jejuensis, Winogradskyella jejuensis Kim and Oh 2015, Winogradskyella sp. CP32, strain CP32
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