STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB47788.1Hypothetical protein. (384 aa)    
Predicted Functional Partners:
GAB47363.1
Hypothetical protein.
     0.868
GAB47362.1
Putative glycosyltransferase.
 
     0.805
GAB47364.1
Putative glycosyltransferase.
 
     0.786
GAB47365.1
Hypothetical protein.
 
     0.781
GAB49590.1
Hypothetical protein.
  
     0.611
GAB47789.1
Putative tRNA-dihydrouridine synthase.
       0.594
GAB49040.1
Hypothetical protein.
  
     0.592
GAB48182.1
Hypothetical protein.
  
     0.581
GAB49830.1
Hypothetical protein.
  
     0.562
GAB47787.1
Hypothetical protein.
       0.524
Your Current Organism:
Mobilicoccus pelagius
NCBI taxonomy Id: 1089455
Other names: Dermatophilaceae bacterium Aji5-31, M. pelagius NBRC 104925, Mobilicoccus pelagius Aji5-31, Mobilicoccus pelagius NBRC 104925, Mobilicoccus pelagius str. NBRC 104925, Mobilicoccus pelagius strain NBRC 104925
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.