STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383915_03330Unannotated protein. (392 aa)    
Predicted Functional Partners:
GCA_000383915_03334
Unannotated protein.
     0.936
GCA_000383915_03329
Unannotated protein.
 
   0.931
GCA_000383915_03333
Unannotated protein.
     0.893
GCA_000383915_03336
Unannotated protein.
 
 
  0.885
GCA_000383915_03335
Unannotated protein.
 
 
  0.881
GCA_000383915_01082
Unannotated protein.
     0.870
GCA_000383915_03328
Unannotated protein.
 
  0.846
GCA_000383915_03331
Unannotated protein.
 
  0.835
GCA_000383915_00655
Unannotated protein.
 
  0.825
GCA_000383915_04714
Unannotated protein.
 
 0.822
Your Current Organism:
Amycolatopsis benzoatilytica
NCBI taxonomy Id: 1089544
Other names: A. benzoatilytica AK 16/65, Amycolatopsis benzoatilytica AK 16/65, Amycolatopsis benzoatilytica DSM 43387, Amycolatopsis benzoatilytica str. AK 16/65, Amycolatopsis benzoatilytica strain AK 16/65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.