STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383915_07188Unannotated protein. (203 aa)    
Predicted Functional Partners:
GCA_000383915_05813
Unannotated protein.
  
 
 0.897
GCA_000383915_07192
Unannotated protein.
 
  
  0.846
GCA_000383915_04120
Unannotated protein.
 
 
 0.832
GCA_000383915_00913
Unannotated protein.
  
 
 0.819
GCA_000383915_00914
Unannotated protein.
    
 0.819
GCA_000383915_01646
Unannotated protein.
  
 
 0.816
GCA_000383915_00905
Unannotated protein.
     
 0.814
GCA_000383915_01946
Unannotated protein.
     
 0.808
GCA_000383915_06812
Unannotated protein.
     
 0.808
GCA_000383915_05443
Unannotated protein.
    
  0.805
Your Current Organism:
Amycolatopsis benzoatilytica
NCBI taxonomy Id: 1089544
Other names: A. benzoatilytica AK 16/65, Amycolatopsis benzoatilytica AK 16/65, Amycolatopsis benzoatilytica DSM 43387, Amycolatopsis benzoatilytica str. AK 16/65, Amycolatopsis benzoatilytica strain AK 16/65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.