STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384295_04225Unannotated protein. (71 aa)    
Predicted Functional Partners:
GCA_000384295_04226
Unannotated protein.
       0.628
GCA_000384295_04227
Unannotated protein.
       0.600
GCA_000384295_05945
Unannotated protein.
  
    0.545
GCA_000384295_01667
Unannotated protein.
  
  
 0.475
GCA_000384295_04135
Unannotated protein.
  
  
 0.475
GCA_000384295_08306
Unannotated protein.
  
  
 0.475
GCA_000384295_00878
Unannotated protein.
  
    0.472
GCA_000384295_02329
Unannotated protein.
  
    0.472
GCA_000384295_02697
Unannotated protein.
  
    0.472
GCA_000384295_04387
Unannotated protein.
  
    0.472
Your Current Organism:
Amycolatopsis balhimycina
NCBI taxonomy Id: 1089545
Other names: A. balhimycina FH 1894, Amycolatopsis balhimycina DSM 44591, Amycolatopsis balhimycina FH 1894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.