STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384295_07738Unannotated protein. (837 aa)    
Predicted Functional Partners:
GCA_000384295_03320
Unannotated protein.
 
  
 0.800
GCA_000384295_04012
Unannotated protein.
  
  
  0.791
GCA_000384295_04354
Unannotated protein.
  
  
  0.791
GCA_000384295_04564
Unannotated protein.
  
  
  0.779
GCA_000384295_04600
Unannotated protein.
  
     0.773
GCA_000384295_08282
Unannotated protein.
 
     0.773
GCA_000384295_08283
Unannotated protein.
  
     0.773
GCA_000384295_04010
Unannotated protein.
  
     0.772
GCA_000384295_05373
Unannotated protein.
  
     0.772
GCA_000384295_05464
Unannotated protein.
  
     0.772
Your Current Organism:
Amycolatopsis balhimycina
NCBI taxonomy Id: 1089545
Other names: A. balhimycina FH 1894, Amycolatopsis balhimycina DSM 44591, Amycolatopsis balhimycina FH 1894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.