STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000371785_00140Unannotated protein. (150 aa)    
Predicted Functional Partners:
GCA_000371785_00141
Unannotated protein.
       0.773
GCA_000371785_00142
Unannotated protein.
       0.773
GCA_000371785_00143
Unannotated protein.
       0.603
GCA_000371785_00138
Unannotated protein.
       0.545
GCA_000371785_00139
Unannotated protein.
       0.545
GCA_000371785_00144
Unannotated protein.
       0.480
GCA_000371785_00145
Unannotated protein.
       0.480
GCA_000371785_00146
Unannotated protein.
       0.480
GCA_000371785_00147
Unannotated protein.
       0.480
GCA_000371785_00132
Unannotated protein.
       0.414
Your Current Organism:
Actinopolyspora halophila
NCBI taxonomy Id: 1089546
Other names: A. halophila DSM 43834, Actinopolyspora halophila DSM 43834, Actinopolyspora halophila str. DSM 43834, Actinopolyspora halophila strain DSM 43834
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.