STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000371785_03832Unannotated protein. (100 aa)    
Predicted Functional Partners:
GCA_000371785_03502
Unannotated protein.
  
     0.773
GCA_000371785_02208
Unannotated protein.
  
     0.769
GCA_000371785_01591
Unannotated protein.
  
     0.761
GCA_000371785_01505
Unannotated protein.
  
     0.757
GCA_000371785_03646
Unannotated protein.
  
     0.755
GCA_000371785_01820
Unannotated protein.
  
     0.753
GCA_000371785_03829
Unannotated protein.
 
     0.752
GCA_000371785_03674
Unannotated protein.
  
     0.751
GCA_000371785_04626
Unannotated protein.
  
     0.747
GCA_000371785_03864
Unannotated protein.
  
     0.746
Your Current Organism:
Actinopolyspora halophila
NCBI taxonomy Id: 1089546
Other names: A. halophila DSM 43834, Actinopolyspora halophila DSM 43834, Actinopolyspora halophila str. DSM 43834, Actinopolyspora halophila strain DSM 43834
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.