STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383955_00075Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000383955_00076
Unannotated protein.
 0.995
GCA_000383955_05084
Unannotated protein.
 0.991
GCA_000383955_00077
Unannotated protein.
 
 
 0.958
GCA_000383955_05083
Unannotated protein.
 
 
 0.920
GCA_000383955_00605
Unannotated protein.
    
 0.845
GCA_000383955_01751
Unannotated protein.
    
 0.705
GCA_000383955_04621
Unannotated protein.
    
  0.619
GCA_000383955_04603
Unannotated protein.
    
  0.589
GCA_000383955_02563
Unannotated protein.
  
 
 0.583
GCA_000383955_02938
Unannotated protein.
     
 0.583
Your Current Organism:
Rudanella lutea
NCBI taxonomy Id: 1089547
Other names: R. lutea DSM 19387, Rudanella lutea DSM 19387, Rudanella lutea str. DSM 19387, Rudanella lutea strain DSM 19387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.