STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383955_00562Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000383955_00564
Unannotated protein.
 
 
   0.958
GCA_000383955_00561
Unannotated protein.
 
     0.642
GCA_000383955_00569
Unannotated protein.
  
     0.526
GCA_000383955_00983
Unannotated protein.
  
 
 0.505
GCA_000383955_04840
Unannotated protein.
  
 
   0.503
GCA_000383955_04827
Unannotated protein.
  
 
   0.489
GCA_000383955_00566
Unannotated protein.
  
  
  0.484
GCA_000383955_05220
Unannotated protein.
 
  
 0.466
GCA_000383955_05343
Unannotated protein.
    
   0.424
GCA_000383955_04386
Unannotated protein.
     
 0.423
Your Current Organism:
Rudanella lutea
NCBI taxonomy Id: 1089547
Other names: R. lutea DSM 19387, Rudanella lutea DSM 19387, Rudanella lutea str. DSM 19387, Rudanella lutea strain DSM 19387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.