STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383955_02133Unannotated protein. (785 aa)    
Predicted Functional Partners:
GCA_000383955_01643
Unannotated protein.
  
 0.999
GCA_000383955_02116
Unannotated protein.
  
 
 0.954
GCA_000383955_02132
Unannotated protein.
 
    0.943
GCA_000383955_00151
Unannotated protein.
 
 0.942
GCA_000383955_00350
Unannotated protein.
     
 0.829
GCA_000383955_02334
Unannotated protein.
 
 0.821
GCA_000383955_02131
Unannotated protein.
  
  
 0.795
GCA_000383955_02023
Unannotated protein.
  
 0.787
GCA_000383955_01306
Unannotated protein.
 
     0.779
GCA_000383955_00153
Unannotated protein.
  
  
 0.772
Your Current Organism:
Rudanella lutea
NCBI taxonomy Id: 1089547
Other names: R. lutea DSM 19387, Rudanella lutea DSM 19387, Rudanella lutea str. DSM 19387, Rudanella lutea strain DSM 19387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.