STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383955_03544Unannotated protein. (318 aa)    
Predicted Functional Partners:
GCA_000383955_04617
Unannotated protein.
 
  
 0.882
GCA_000383955_00391
Unannotated protein.
 
  
 0.880
GCA_000383955_04446
Unannotated protein.
 
 0.830
GCA_000383955_01008
Unannotated protein.
 
 0.794
GCA_000383955_01198
Unannotated protein.
 
   
 0.776
GCA_000383955_00418
Unannotated protein.
 
  0.759
GCA_000383955_05295
Unannotated protein.
 
  
  0.752
GCA_000383955_01281
Unannotated protein.
 
  0.749
GCA_000383955_01617
Unannotated protein.
 
 0.740
GCA_000383955_00491
Unannotated protein.
 
  
 0.736
Your Current Organism:
Rudanella lutea
NCBI taxonomy Id: 1089547
Other names: R. lutea DSM 19387, Rudanella lutea DSM 19387, Rudanella lutea str. DSM 19387, Rudanella lutea strain DSM 19387
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.