STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383955_04088Unannotated protein. (1980 aa)    
Predicted Functional Partners:
GCA_000383955_01225
Unannotated protein.
  
  
 
0.798
GCA_000383955_01331
Unannotated protein.
  
  
  0.692
GCA_000383955_03022
Unannotated protein.
  
 
  0.584
GCA_000383955_00421
Unannotated protein.
  
     0.552
GCA_000383955_04446
Unannotated protein.
    
  0.525
GCA_000383955_03185
Unannotated protein.
  
  
  0.524
GCA_000383955_01898
Unannotated protein.
  
 
  0.506
GCA_000383955_03115
Unannotated protein.
  
  
  0.495
GCA_000383955_04414
Unannotated protein.
  
 
  0.488
GCA_000383955_00972
Unannotated protein.
  
 
  0.479
Your Current Organism:
Rudanella lutea
NCBI taxonomy Id: 1089547
Other names: R. lutea DSM 19387, Rudanella lutea DSM 19387, Rudanella lutea str. DSM 19387, Rudanella lutea strain DSM 19387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.