STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383955_04090Unannotated protein. (538 aa)    
Predicted Functional Partners:
GCA_000383955_02364
Unannotated protein.
 0.999
GCA_000383955_04503
Unannotated protein.
 
 0.995
GCA_000383955_02150
Unannotated protein.
  
 0.851
GCA_000383955_03203
Unannotated protein.
  
  
 
0.822
GCA_000383955_01040
Unannotated protein.
  
 0.806
GCA_000383955_01101
Unannotated protein.
    
  0.779
GCA_000383955_00666
Unannotated protein.
  
 0.755
GCA_000383955_03888
Unannotated protein.
  
 0.755
GCA_000383955_04015
Unannotated protein.
  
 
  0.737
GCA_000383955_00525
Unannotated protein.
  
  
  0.722
Your Current Organism:
Rudanella lutea
NCBI taxonomy Id: 1089547
Other names: R. lutea DSM 19387, Rudanella lutea DSM 19387, Rudanella lutea str. DSM 19387, Rudanella lutea strain DSM 19387
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.