STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383955_04938Unannotated protein. (208 aa)    
Predicted Functional Partners:
GCA_000383955_04937
Unannotated protein.
     
 0.786
GCA_000383955_04939
Unannotated protein.
       0.757
GCA_000383955_04940
Unannotated protein.
       0.736
GCA_000383955_01131
Unannotated protein.
  
     0.469
GCA_000383955_04031
Unannotated protein.
  
     0.462
GCA_000383955_02747
Unannotated protein.
  
     0.443
GCA_000383955_04261
Unannotated protein.
  
     0.436
GCA_000383955_04936
Unannotated protein.
       0.436
GCA_000383955_02338
Unannotated protein.
  
     0.427
GCA_000383955_04975
Unannotated protein.
  
     0.422
Your Current Organism:
Rudanella lutea
NCBI taxonomy Id: 1089547
Other names: R. lutea DSM 19387, Rudanella lutea DSM 19387, Rudanella lutea str. DSM 19387, Rudanella lutea strain DSM 19387
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.