STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000419585_02101Unannotated protein. (484 aa)    
Predicted Functional Partners:
GCA_000419585_01252
Unannotated protein.
 
 
 0.960
GCA_000419585_01195
Unannotated protein.
 
0.874
GCA_000419585_01832
Unannotated protein.
    
 0.784
GCA_000419585_01300
Unannotated protein.
    
  0.741
GCA_000419585_01697
Unannotated protein.
    
  0.741
GCA_000419585_02343
Unannotated protein.
    
  0.741
GCA_000419585_02671
Unannotated protein.
    
  0.741
GCA_000419585_01197
Unannotated protein.
 
 
 0.711
GCA_000419585_00980
Unannotated protein.
   
 
  0.683
GCA_000419585_01189
Unannotated protein.
  
  
 
0.676
Your Current Organism:
Salisaeta longa
NCBI taxonomy Id: 1089550
Other names: S. longa DSM 21114, Salisaeta longa DSM 21114, Salisaeta longa str. DSM 21114, Salisaeta longa strain DSM 21114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.