STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427665_00455Unannotated protein. (541 aa)    
Predicted Functional Partners:
GCA_000427665_02775
Unannotated protein.
  
 
 0.903
GCA_000427665_01255
Unannotated protein.
  
 
 0.839
GCA_000427665_01003
Unannotated protein.
  
 
 0.783
GCA_000427665_04588
Unannotated protein.
  
 
 0.691
GCA_000427665_00934
Unannotated protein.
  
  
 0.617
GCA_000427665_01005
Unannotated protein.
    
 0.603
GCA_000427665_01008
Unannotated protein.
    
 0.603
GCA_000427665_00456
Unannotated protein.
       0.570
GCA_000427665_00457
Unannotated protein.
       0.542
GCA_000427665_01254
Unannotated protein.
    
 0.521
Your Current Organism:
Geminicoccus roseus
NCBI taxonomy Id: 1089551
Other names: G. roseus DSM 18922, Geminicoccus roseus DSM 18922, Geminicoccus roseus str. DSM 18922, Geminicoccus roseus strain DSM 18922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.