STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427665_02848Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_000427665_02849
Unannotated protein.
 
   
 0.871
GCA_000427665_02847
Unannotated protein.
       0.732
GCA_000427665_02844
Unannotated protein.
 
     0.647
GCA_000427665_02845
Unannotated protein.
 
     0.619
GCA_000427665_02846
Unannotated protein.
       0.501
GCA_000427665_00353
Unannotated protein.
 
     0.461
GCA_000427665_02811
Unannotated protein.
  
     0.458
GCA_000427665_00189
Unannotated protein.
    
 
 0.456
GCA_000427665_02239
Unannotated protein.
    
   0.452
GCA_000427665_00625
Unannotated protein.
  
     0.430
Your Current Organism:
Geminicoccus roseus
NCBI taxonomy Id: 1089551
Other names: G. roseus DSM 18922, Geminicoccus roseus DSM 18922, Geminicoccus roseus str. DSM 18922, Geminicoccus roseus strain DSM 18922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.