STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427665_03124Unannotated protein. (470 aa)    
Predicted Functional Partners:
GCA_000427665_03123
Unannotated protein.
 
   
 0.761
GCA_000427665_03126
Unannotated protein.
    
  0.748
GCA_000427665_03125
Unannotated protein.
 
     0.681
GCA_000427665_04894
Unannotated protein.
  
     0.649
GCA_000427665_04892
Unannotated protein.
  
     0.620
GCA_000427665_04886
Unannotated protein.
  
     0.589
GCA_000427665_04889
Unannotated protein.
  
     0.563
GCA_000427665_01537
Unannotated protein.
  
     0.548
GCA_000427665_04891
Unannotated protein.
  
     0.537
GCA_000427665_03851
Unannotated protein.
  
     0.497
Your Current Organism:
Geminicoccus roseus
NCBI taxonomy Id: 1089551
Other names: G. roseus DSM 18922, Geminicoccus roseus DSM 18922, Geminicoccus roseus str. DSM 18922, Geminicoccus roseus strain DSM 18922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.