STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427665_04422Unannotated protein. (443 aa)    
Predicted Functional Partners:
GCA_000427665_04423
Unannotated protein.
 
     0.929
GCA_000427665_04421
Unannotated protein.
 
   
 0.905
GCA_000427665_04193
Unannotated protein.
 
   
 0.796
GCA_000427665_04177
Unannotated protein.
 
     0.712
GCA_000427665_03628
Unannotated protein.
    0.662
GCA_000427665_04188
Unannotated protein.
  
     0.646
GCA_000427665_03303
Unannotated protein.
 
     0.601
GCA_000427665_03222
Unannotated protein.
  
     0.564
GCA_000427665_01459
Unannotated protein.
  
     0.531
GCA_000427665_04191
Unannotated protein.
  
     0.514
Your Current Organism:
Geminicoccus roseus
NCBI taxonomy Id: 1089551
Other names: G. roseus DSM 18922, Geminicoccus roseus DSM 18922, Geminicoccus roseus str. DSM 18922, Geminicoccus roseus strain DSM 18922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.