STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427665_04783Unannotated protein. (390 aa)    
Predicted Functional Partners:
GCA_000427665_04784
Unannotated protein.
 
   
 0.929
GCA_000427665_04785
Unannotated protein.
 
  
  0.874
GCA_000427665_02628
Unannotated protein.
    
 0.768
GCA_000427665_03153
Unannotated protein.
    
  0.644
GCA_000427665_00904
Unannotated protein.
 
   
 0.588
GCA_000427665_01180
Unannotated protein.
 
   
 0.586
GCA_000427665_05227
Unannotated protein.
    
   0.558
GCA_000427665_02432
Unannotated protein.
     
 0.494
GCA_000427665_00037
Unannotated protein.
   
 0.457
GCA_000427665_00678
Unannotated protein.
 
   
 0.444
Your Current Organism:
Geminicoccus roseus
NCBI taxonomy Id: 1089551
Other names: G. roseus DSM 18922, Geminicoccus roseus DSM 18922, Geminicoccus roseus str. DSM 18922, Geminicoccus roseus strain DSM 18922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.