STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515255_00526Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_000515255_00527
Unannotated protein.
 
     0.944
GCA_000515255_00528
Unannotated protein.
 
     0.943
GCA_000515255_00773
Unannotated protein.
  
     0.664
GCA_000515255_03506
Unannotated protein.
  
     0.657
GCA_000515255_02644
Unannotated protein.
  
     0.611
GCA_000515255_00384
Unannotated protein.
  
     0.581
GCA_000515255_02668
Unannotated protein.
  
     0.513
GCA_000515255_02426
Unannotated protein.
  
     0.480
GCA_000515255_02641
Unannotated protein.
  
    0.472
GCA_000515255_00529
Unannotated protein.
       0.456
Your Current Organism:
Rhodovibrio salinarum
NCBI taxonomy Id: 1089552
Other names: R. salinarum DSM 9154, Rhodovibrio salinarum DSM 9154, Rhodovibrio salinarum str. DSM 9154, Rhodovibrio salinarum strain DSM 9154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.