STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515255_00580Unannotated protein. (96 aa)    
Predicted Functional Partners:
GCA_000515255_01863
Unannotated protein.
    
 0.736
GCA_000515255_00244
Unannotated protein.
    
 0.732
GCA_000515255_00411
Unannotated protein.
     
 0.703
GCA_000515255_03419
Unannotated protein.
   
 0.665
GCA_000515255_01925
Unannotated protein.
   
 0.656
GCA_000515255_02348
Unannotated protein.
   
 
 0.656
GCA_000515255_03100
Unannotated protein.
   
 
 0.655
GCA_000515255_03068
Unannotated protein.
   
 
  0.644
GCA_000515255_00425
Unannotated protein.
    
 0.642
GCA_000515255_00397
Unannotated protein.
   
  0.609
Your Current Organism:
Rhodovibrio salinarum
NCBI taxonomy Id: 1089552
Other names: R. salinarum DSM 9154, Rhodovibrio salinarum DSM 9154, Rhodovibrio salinarum str. DSM 9154, Rhodovibrio salinarum strain DSM 9154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.