STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515255_01267Unannotated protein. (176 aa)    
Predicted Functional Partners:
GCA_000515255_01688
Unannotated protein.
  
   
 0.789
GCA_000515255_03830
Unannotated protein.
  
   
 0.773
GCA_000515255_03472
Unannotated protein.
  
     0.728
GCA_000515255_02427
Unannotated protein.
  
   
 0.725
GCA_000515255_00661
Unannotated protein.
  
     0.707
GCA_000515255_00430
Unannotated protein.
  
     0.683
GCA_000515255_03437
Unannotated protein.
  
     0.678
GCA_000515255_02494
Unannotated protein.
  
     0.670
GCA_000515255_00660
Unannotated protein.
  
     0.668
GCA_000515255_00808
Unannotated protein.
  
     0.630
Your Current Organism:
Rhodovibrio salinarum
NCBI taxonomy Id: 1089552
Other names: R. salinarum DSM 9154, Rhodovibrio salinarum DSM 9154, Rhodovibrio salinarum str. DSM 9154, Rhodovibrio salinarum strain DSM 9154
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.