STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515255_03516Unannotated protein. (156 aa)    
Predicted Functional Partners:
GCA_000515255_03517
Unannotated protein.
 
  
 0.961
GCA_000515255_03514
Unannotated protein.
 
    0.821
GCA_000515255_03513
Unannotated protein.
 
    0.799
GCA_000515255_03515
Unannotated protein.
     
 0.728
GCA_000515255_03523
Unannotated protein.
    0.634
GCA_000515255_03322
Unannotated protein.
 
   
 0.629
GCA_000515255_02721
Unannotated protein.
 
  
 0.547
GCA_000515255_02568
Unannotated protein.
  
   
 0.543
GCA_000515255_02882
Unannotated protein.
  
  
 0.531
GCA_000515255_02551
Unannotated protein.
  
   
 0.475
Your Current Organism:
Rhodovibrio salinarum
NCBI taxonomy Id: 1089552
Other names: R. salinarum DSM 9154, Rhodovibrio salinarum DSM 9154, Rhodovibrio salinarum str. DSM 9154, Rhodovibrio salinarum strain DSM 9154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.