STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515255_03618Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_000515255_03617
Unannotated protein.
 
  
  0.723
GCA_000515255_03614
Unannotated protein.
 
  
  0.677
GCA_000515255_01945
Unannotated protein.
 
  
 0.670
GCA_000515255_03613
Unannotated protein.
 
  
 0.565
GCA_000515255_03612
Unannotated protein.
 
     0.541
GCA_000515255_03619
Unannotated protein.
 
     0.539
GCA_000515255_03608
Unannotated protein.
 
  
 0.512
GCA_000515255_03616
Unannotated protein.
       0.478
GCA_000515255_01940
Unannotated protein.
 
     0.460
GCA_000515255_00197
Unannotated protein.
 
     0.423
Your Current Organism:
Rhodovibrio salinarum
NCBI taxonomy Id: 1089552
Other names: R. salinarum DSM 9154, Rhodovibrio salinarum DSM 9154, Rhodovibrio salinarum str. DSM 9154, Rhodovibrio salinarum strain DSM 9154
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.