Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFV10354.1 | AFV10356.1 | Tph_c01060 | Tph_c01080 | ABC transporter, periplasmic binding protein. | ABC transporter, ATP binding protein. | 0.979 |
AFV10354.1 | cooC1 | Tph_c01060 | Tph_c01050 | ABC transporter, periplasmic binding protein. | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC. | 0.774 |
AFV10354.1 | yaeB | Tph_c01060 | Tph_c01040 | ABC transporter, periplasmic binding protein. | Methyltransferase YaeB. | 0.680 |
AFV10356.1 | AFV10354.1 | Tph_c01080 | Tph_c01060 | ABC transporter, ATP binding protein. | ABC transporter, periplasmic binding protein. | 0.979 |
AFV10356.1 | cooC1 | Tph_c01080 | Tph_c01050 | ABC transporter, ATP binding protein. | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC. | 0.780 |
AFV10356.1 | yaeB | Tph_c01080 | Tph_c01040 | ABC transporter, ATP binding protein. | Methyltransferase YaeB. | 0.682 |
acsA | acsC | Tph_c15170 | Tph_c15160 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Corrinoid/iron-sulfur protein large subunit AcsC. | 0.999 |
acsA | acsD | Tph_c15170 | Tph_c15140 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Corrinoid/iron-sulfur protein small subunit AcsD. | 0.999 |
acsA | cooC1 | Tph_c15170 | Tph_c01050 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC. | 0.943 |
acsA | fcha | Tph_c15170 | Tph_c20430 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Methenyltetrahydrofolate cyclohydrolase Fcha. | 0.473 |
acsA | gcvH2 | Tph_c15170 | Tph_c19550 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Glycine cleavage system H protein GcvH; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.440 |
acsC | acsA | Tph_c15160 | Tph_c15170 | Corrinoid/iron-sulfur protein large subunit AcsC. | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | 0.999 |
acsC | acsD | Tph_c15160 | Tph_c15140 | Corrinoid/iron-sulfur protein large subunit AcsC. | Corrinoid/iron-sulfur protein small subunit AcsD. | 0.999 |
acsC | cooC1 | Tph_c15160 | Tph_c01050 | Corrinoid/iron-sulfur protein large subunit AcsC. | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC. | 0.961 |
acsC | fcha | Tph_c15160 | Tph_c20430 | Corrinoid/iron-sulfur protein large subunit AcsC. | Methenyltetrahydrofolate cyclohydrolase Fcha. | 0.863 |
acsC | gcvH2 | Tph_c15160 | Tph_c19550 | Corrinoid/iron-sulfur protein large subunit AcsC. | Glycine cleavage system H protein GcvH; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.806 |
acsC | rpoN | Tph_c15160 | Tph_c06730 | Corrinoid/iron-sulfur protein large subunit AcsC. | RNA polymerase sigma-54 factor RpoN. | 0.689 |
acsC | sigH | Tph_c15160 | Tph_c04970 | Corrinoid/iron-sulfur protein large subunit AcsC. | RNA polymerase sigma-H factor SigH; Belongs to the sigma-70 factor family. | 0.689 |
acsD | acsA | Tph_c15140 | Tph_c15170 | Corrinoid/iron-sulfur protein small subunit AcsD. | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | 0.999 |
acsD | acsC | Tph_c15140 | Tph_c15160 | Corrinoid/iron-sulfur protein small subunit AcsD. | Corrinoid/iron-sulfur protein large subunit AcsC. | 0.999 |
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