STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yoaEMolybdopterin containing oxidoreductase YoaE; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (525 aa)    
Predicted Functional Partners:
fdhA4
Formate dehydrogenase subunit alpha.
 
     0.970
AFV10420.1
Hypothetical protein.
 
 
 0.961
AFV11719.1
CoB--CoM heterodisulfide reductase-like protein.
   
 
 0.863
bthL
Pyrogallol hydroxytransferase small subunit BthL.
 
 
 0.736
tuf2
Elongation factor Tu 2; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.684
AFV11087.1
4Fe-4S ferredoxin.
 
 
 0.665
nuoG
NADH-quinone oxidoreductase subunit G.
 
     0.653
nrfC
Fe-S protein NrfC.
 
 
 
 0.651
fdhB
Formate dehydrogenase subunit beta.
 
     0.638
fdhA2
Formate dehydrogenase subunit alpha.
  
     0.626
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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