STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsCPolysaccharide biosynthesis protein EpsC. (663 aa)    
Predicted Functional Partners:
AFV10518.1
Polysaccharide biosynthesis protein.
 
  
 0.842
manC2
Mannose-1-phosphate guanylyltransferase ManC.
  
  
 0.788
AFV10511.1
Chain length determinant protein.
 
  
 0.779
glmM1
Phosphoglucosamine mutase GlmM.
  
  
 0.765
AFV10517.1
UDP-glucuronate 5'-epimerase.
 
  
 0.696
yveL
Tyrosine-protein kinase YveL.
 
  
 0.695
AFV10514.1
Glycosyl transferase, group 4.
 
   
 0.690
tuaD
UDP-glucose 6-dehydrogenase TuaD.
  
 0.689
AFV10520.1
Glycosyl transferase.
 
  
 0.631
AFV10513.1
NAD-dependent epimerase.
  
  
 0.627
Your Current Organism:
Thermacetogenium phaeum
NCBI taxonomy Id: 1089553
Other names: Clostridiaceae str. PB, T. phaeum DSM 12270, Thermacetogenium phaeum DSM 12270, Thermacetogenium phaeum PB, Thermacetogenium phaeum str. DSM 12270, Thermacetogenium phaeum strain DSM 12270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.